Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 RNA5SP416-201ENST00000516838 111 ntBASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 ZNF259P1-201ENST00000407656 1365 ntBASIC14.92□□□□□ -0.02
REEP3Q6NUK4 BNIP3P1-202ENST00000550043 1585 ntBASIC14.92□□□□□ -0.02
REEP3Q6NUK4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AC138035.3-201ENST00000622706 2791 ntBASIC14.92□□□□□ -0.02
REEP3Q6NUK4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 IL9RP2-201ENST00000423948 1312 ntBASIC14.92□□□□□ -0.02
REEP3Q6NUK4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AL591424.1-201ENST00000442569 1213 ntBASIC14.91□□□□□ -0.02
REEP3Q6NUK4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AC008267.7-201ENST00000624570 1194 ntBASIC14.91□□□□□ -0.02
REEP3Q6NUK4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AP002414.2-201ENST00000591780 3365 ntBASIC14.91□□□□□ -0.02
REEP3Q6NUK4 FOXO1B-201ENST00000504678 1527 ntBASIC14.91□□□□□ -0.02
REEP3Q6NUK4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
REEP3Q6NUK4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
REEP3Q6NUK4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms