Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 ENPP7P14-201ENST00000621765 1040 ntBASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 TUBBP5-203ENST00000508529 1334 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AL133267.1-201ENST00000398220 340 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AL355334.1-201ENST00000417713 215 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 FOS-204ENST00000554617 796 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AL160314.3-201ENST00000556041 767 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AC138649.2-201ENST00000615886 705 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AC079336.7-201ENST00000623428 1078 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AC006449.6-201ENST00000612330 2296 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 RN7SL774P-201ENST00000577467 290 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 AC091812.3-201ENST00000621362 345 ntBASIC10.47□□□□□ -0.73
VPS13DQ5THJ4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 AC008132.1-202ENST00000342005 1389 ntBASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 AC009090.5-201ENST00000624886 2285 ntBASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 RPSAP36-202ENST00000494591 1261 ntBASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms