Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 SNHG9-202ENST00000564014 471 ntBASIC15.68■□□□□ 0.1
SFT2D3Q587I9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 MIR4492-201ENST00000581627 80 ntBASIC15.68■□□□□ 0.1
SFT2D3Q587I9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 CYP2A7P1-201ENST00000595391 815 ntBASIC15.68■□□□□ 0.1
SFT2D3Q587I9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 NORAD-201ENST00000565493 5339 ntBASIC15.68■□□□□ 0.1
SFT2D3Q587I9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.68■□□□□ 0.1
SFT2D3Q587I9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 AC069224.1-201ENST00000566372 1715 ntBASIC15.68■□□□□ 0.1
SFT2D3Q587I9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFT2D3Q587I9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.67■□□□□ 0.1
SFT2D3Q587I9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 AL009183.1-201ENST00000603760 355 ntBASIC15.67■□□□□ 0.1
SFT2D3Q587I9 AC099522.2-201ENST00000607001 744 ntBASIC15.67■□□□□ 0.1
SFT2D3Q587I9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFT2D3Q587I9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 RNU1-129P-201ENST00000384064 167 ntBASIC15.66■□□□□ 0.1
SFT2D3Q587I9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 AC254562.1-201ENST00000417586 456 ntBASIC15.66■□□□□ 0.1
SFT2D3Q587I9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.66■□□□□ 0.1
SFT2D3Q587I9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms