Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHROOM1Q2M3G4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 AP003680.1-201ENST00000598970 3660 ntBASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 C1QBPP1-201ENST00000400117 770 ntBASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHROOM1Q2M3G4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.46■□□□□ 0.54
SHROOM1Q2M3G4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.46■□□□□ 0.54
SHROOM1Q2M3G4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AC068587.3-201ENST00000526613 355 ntBASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AP005482.1-201ENST00000563722 1273 ntBASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 MIR4538-201ENST00000581377 78 ntBASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AC000095.1-201ENST00000603208 874 ntBASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 AC244669.2-201ENST00000612320 853 ntBASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHROOM1Q2M3G4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms