Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 MIR770-201ENST00000390219 98 ntBASIC20.66■□□□□ 0.9
CCDC27Q2M243 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AC093214.1-201ENST00000511688 1107 ntBASIC20.66■□□□□ 0.9
CCDC27Q2M243 RNA5SP421-201ENST00000516864 134 ntBASIC20.66■□□□□ 0.9
CCDC27Q2M243 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AL391069.4-201ENST00000609583 481 ntBASIC20.66■□□□□ 0.9
CCDC27Q2M243 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AF228730.6-201ENST00000641497 218 ntBASIC20.66■□□□□ 0.9
CCDC27Q2M243 AC084121.3-201ENST00000641716 218 ntBASIC20.66■□□□□ 0.9
CCDC27Q2M243 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.66■□□□□ 0.9
CCDC27Q2M243 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC27Q2M243 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 AC092127.1-201ENST00000567093 3455 ntBASIC20.65■□□□□ 0.9
CCDC27Q2M243 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 AC009090.5-201ENST00000624886 2285 ntBASIC20.65■□□□□ 0.9
CCDC27Q2M243 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.65■□□□□ 0.9
CCDC27Q2M243 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC27Q2M243 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC27Q2M243 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC27Q2M243 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC27Q2M243 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC27Q2M243 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC27Q2M243 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC27Q2M243 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC27Q2M243 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC27Q2M243 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC27Q2M243 AC092850.2-201ENST00000623821 2697 ntBASIC20.64■□□□□ 0.89
CCDC27Q2M243 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC27Q2M243 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms