Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
RAB40BQ12829 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40BQ12829 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.34□□□□□ -0.11
RAB40BQ12829 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB40BQ12829 CXCL1P1-201ENST00000502804 216 ntBASIC14.34□□□□□ -0.11
RAB40BQ12829 AC109635.5-201ENST00000533593 962 ntBASIC14.34□□□□□ -0.11
RAB40BQ12829 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 MIR600HG-201ENST00000449175 5984 ntBASIC14.34□□□□□ -0.11
RAB40BQ12829 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RAB40BQ12829 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB40BQ12829 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40BQ12829 LINC00528-201ENST00000600723 2160 ntBASIC14.34□□□□□ -0.11
RAB40BQ12829 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 AC007191.1-201ENST00000623179 2995 ntBASIC14.34□□□□□ -0.11
RAB40BQ12829 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40BQ12829 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40BQ12829 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40BQ12829 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40BQ12829 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40BQ12829 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40BQ12829 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
RAB40BQ12829 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40BQ12829 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RAB40BQ12829 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.33□□□□□ -0.11
RAB40BQ12829 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40BQ12829 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
RAB40BQ12829 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 GPX1P2-201ENST00000429271 606 ntBASIC14.33□□□□□ -0.12
RAB40BQ12829 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB40BQ12829 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 AC002347.1-201ENST00000569543 541 ntBASIC14.33□□□□□ -0.12
RAB40BQ12829 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 AL356488.2-201ENST00000602755 427 ntBASIC14.33□□□□□ -0.12
RAB40BQ12829 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 AL358472.4-201ENST00000633140 710 ntBASIC14.33□□□□□ -0.12
RAB40BQ12829 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
RAB40BQ12829 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40BQ12829 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40BQ12829 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 GRK6P1-201ENST00000400595 1711 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40BQ12829 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 AC073439.1-201ENST00000624121 1774 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
RAB40BQ12829 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 FGD5P1-202ENST00000614866 2498 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms