Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 GRK6P1-201ENST00000400595 1711 ntBASIC14.9□□□□□ -0.02
CD47Q08722 AC105250.1-201ENST00000509378 2057 ntBASIC14.9□□□□□ -0.02
CD47Q08722 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.9□□□□□ -0.02
CD47Q08722 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 AL031284.1-201ENST00000419297 478 ntBASIC14.9□□□□□ -0.02
CD47Q08722 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.9□□□□□ -0.02
CD47Q08722 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.9□□□□□ -0.02
CD47Q08722 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.9□□□□□ -0.02
CD47Q08722 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CD47Q08722 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.9□□□□□ -0.02
CD47Q08722 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 AC087641.1-201ENST00000557561 1021 ntBASIC14.9□□□□□ -0.02
CD47Q08722 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.9□□□□□ -0.02
CD47Q08722 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 AC112693.3-201ENST00000624819 1983 ntBASIC14.9□□□□□ -0.02
CD47Q08722 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CD47Q08722 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CD47Q08722 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.89□□□□□ -0.03
CD47Q08722 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 AL160237.2-201ENST00000556165 472 ntBASIC14.89□□□□□ -0.03
CD47Q08722 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.89□□□□□ -0.03
CD47Q08722 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.89□□□□□ -0.03
CD47Q08722 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 MIR7706-201ENST00000613747 67 ntBASIC14.89□□□□□ -0.03
CD47Q08722 AC004790.2-201ENST00000623588 572 ntBASIC14.89□□□□□ -0.03
CD47Q08722 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 AC232323.1-201ENST00000540724 2099 ntBASIC14.89□□□□□ -0.03
CD47Q08722 REXO1L5P-201ENST00000622260 2098 ntBASIC14.89□□□□□ -0.03
CD47Q08722 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.89□□□□□ -0.03
CD47Q08722 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD47Q08722 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD47Q08722 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms