Protein–RNA interactions for Protein: Q06124

PTPN11, Tyrosine-protein phosphatase non-receptor type 11, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11Q06124 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN11Q06124 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN11Q06124 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PTPN11Q06124 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN11Q06124 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 AP001282.1-201ENST00000531301 1499 ntBASIC17.56■□□□□ 0.4
PTPN11Q06124 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PTPN11Q06124 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN11Q06124 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PTPN11Q06124 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
PTPN11Q06124 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PTPN11Q06124 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN11Q06124 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 RPL7P3-201ENST00000441388 714 ntBASIC17.56■□□□□ 0.4
PTPN11Q06124 PHKG1P2-201ENST00000457537 863 ntBASIC17.56■□□□□ 0.4
PTPN11Q06124 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN11Q06124 AP001889.1-201ENST00000525414 633 ntBASIC17.56■□□□□ 0.4
PTPN11Q06124 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PTPN11Q06124 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPN11Q06124 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PTPN11Q06124 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN11Q06124 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPN11Q06124 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN11Q06124 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PTPN11Q06124 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN11Q06124 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PTPN11Q06124 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN11Q06124 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTPN11Q06124 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 AC099336.1-201ENST00000417053 1171 ntBASIC17.55■□□□□ 0.4
PTPN11Q06124 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN11Q06124 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
PTPN11Q06124 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN11Q06124 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 AP000812.2-201ENST00000538934 718 ntBASIC17.55■□□□□ 0.4
PTPN11Q06124 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN11Q06124 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PTPN11Q06124 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PTPN11Q06124 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN11Q06124 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN11Q06124 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN11Q06124 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN11Q06124 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN11Q06124 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN11Q06124 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN11Q06124 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN11Q06124 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN11Q06124 AC136604.1-201ENST00000418535 575 ntBASIC17.54■□□□□ 0.4
PTPN11Q06124 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN11Q06124 AL355864.2-201ENST00000447420 863 ntBASIC17.54■□□□□ 0.4
PTPN11Q06124 BCRP2-202ENST00000447763 634 ntBASIC17.54■□□□□ 0.4
PTPN11Q06124 AL355994.2-201ENST00000447882 704 ntBASIC17.54■□□□□ 0.4
PTPN11Q06124 CSF2RBP1-201ENST00000447905 391 ntBASIC17.54■□□□□ 0.4
PTPN11Q06124 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN11Q06124 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN11Q06124 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN11Q06124 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN11Q06124 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms