Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC093433.1-201ENST00000458048 571 ntBASIC16.82■□□□□ 0.28
UBE3AQ05086 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.82■□□□□ 0.28
UBE3AQ05086 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
UBE3AQ05086 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE3AQ05086 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
UBE3AQ05086 AC008687.7-202ENST00000637404 953 ntBASIC16.82■□□□□ 0.28
UBE3AQ05086 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE3AQ05086 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBE3AQ05086 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE3AQ05086 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE3AQ05086 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE3AQ05086 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE3AQ05086 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE3AQ05086 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE3AQ05086 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE3AQ05086 HLA-A-202ENST00000376806 1854 ntBASIC16.82■□□□□ 0.28
UBE3AQ05086 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
UBE3AQ05086 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE3AQ05086 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
UBE3AQ05086 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE3AQ05086 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBE3AQ05086 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE3AQ05086 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 AC139713.2-201ENST00000641328 2723 ntBASIC16.81■□□□□ 0.28
UBE3AQ05086 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE3AQ05086 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
UBE3AQ05086 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 KRT90P-201ENST00000549264 1064 ntBASIC16.81■□□□□ 0.28
UBE3AQ05086 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE3AQ05086 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE3AQ05086 AC005252.2-201ENST00000624630 1141 ntBASIC16.81■□□□□ 0.28
UBE3AQ05086 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.81■□□□□ 0.28
UBE3AQ05086 AC068587.10-201ENST00000641210 219 ntBASIC16.81■□□□□ 0.28
UBE3AQ05086 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBE3AQ05086 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE3AQ05086 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE3AQ05086 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE3AQ05086 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE3AQ05086 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBE3AQ05086 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBE3AQ05086 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE3AQ05086 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE3AQ05086 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE3AQ05086 C2orf27AP3-201ENST00000434123 579 ntBASIC16.8■□□□□ 0.28
UBE3AQ05086 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 AC099548.2-209ENST00000480264 625 ntBASIC16.8■□□□□ 0.28
UBE3AQ05086 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE3AQ05086 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE3AQ05086 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBE3AQ05086 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
UBE3AQ05086 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE3AQ05086 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE3AQ05086 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE3AQ05086 AL450472.2-201ENST00000603663 1156 ntBASIC16.8■□□□□ 0.28
UBE3AQ05086 AL354718.3-201ENST00000616414 581 ntBASIC16.8■□□□□ 0.28
UBE3AQ05086 CR382287.1-201ENST00000623954 586 ntBASIC16.8■□□□□ 0.28
UBE3AQ05086 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UBE3AQ05086 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE3AQ05086 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms