Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP1Q04837 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP1Q04837 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP1Q04837 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP1Q04837 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
SSBP1Q04837 AC023024.2-201ENST00000623561 1993 ntBASIC13.54□□□□□ -0.24
SSBP1Q04837 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.54□□□□□ -0.24
SSBP1Q04837 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.54□□□□□ -0.24
SSBP1Q04837 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SSBP1Q04837 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.54□□□□□ -0.24
SSBP1Q04837 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.54□□□□□ -0.24
SSBP1Q04837 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.54□□□□□ -0.24
SSBP1Q04837 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.54□□□□□ -0.24
SSBP1Q04837 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.54□□□□□ -0.24
SSBP1Q04837 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 AC006557.2-201ENST00000592985 1240 ntBASIC13.54□□□□□ -0.24
SSBP1Q04837 AC099336.1-202ENST00000602961 463 ntBASIC13.54□□□□□ -0.24
SSBP1Q04837 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SSBP1Q04837 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSBP1Q04837 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.54□□□□□ -0.24
SSBP1Q04837 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 SBF1P1-201ENST00000444527 5631 ntBASIC13.54□□□□□ -0.24
SSBP1Q04837 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP1Q04837 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSBP1Q04837 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.54□□□□□ -0.24
SSBP1Q04837 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP1Q04837 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 AC009090.5-201ENST00000624886 2285 ntBASIC13.53□□□□□ -0.24
SSBP1Q04837 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 ELK2BP-201ENST00000415014 1224 ntBASIC13.53□□□□□ -0.24
SSBP1Q04837 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.53□□□□□ -0.24
SSBP1Q04837 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.53□□□□□ -0.24
SSBP1Q04837 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 AC005332.1-201ENST00000577698 1310 ntBASIC13.53□□□□□ -0.24
SSBP1Q04837 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 AC006504.4-201ENST00000592118 1568 ntBASIC13.53□□□□□ -0.24
SSBP1Q04837 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSBP1Q04837 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP1Q04837 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP1Q04837 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
SSBP1Q04837 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.52□□□□□ -0.24
SSBP1Q04837 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms