Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL135744.1-201ENST00000565098 629 ntBASIC14.83□□□□□ -0.04
HOXC5Q00444 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.83□□□□□ -0.04
HOXC5Q00444 AC092902.6-201ENST00000641783 218 ntBASIC14.83□□□□□ -0.04
HOXC5Q00444 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.83□□□□□ -0.04
HOXC5Q00444 FLJ16779-201ENST00000612722 7638 ntBASIC14.83□□□□□ -0.04
HOXC5Q00444 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HOXC5Q00444 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HOXC5Q00444 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC5Q00444 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC5Q00444 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC5Q00444 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 SNX18-202ENST00000343017 3140 ntBASIC14.82□□□□□ -0.04
HOXC5Q00444 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HOXC5Q00444 AC018892.3-201ENST00000623986 2499 ntBASIC14.82□□□□□ -0.04
HOXC5Q00444 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 TFAMP1-201ENST00000412727 736 ntBASIC14.82□□□□□ -0.04
HOXC5Q00444 AL355306.1-201ENST00000415580 579 ntBASIC14.82□□□□□ -0.04
HOXC5Q00444 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
HOXC5Q00444 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HOXC5Q00444 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.82□□□□□ -0.04
HOXC5Q00444 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC5Q00444 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
HOXC5Q00444 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HOXC5Q00444 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HOXC5Q00444 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC5Q00444 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC5Q00444 TCAF2P1-201ENST00000291129 2421 ntBASIC14.82□□□□□ -0.04
HOXC5Q00444 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HOXC5Q00444 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HOXC5Q00444 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.81□□□□□ -0.04
HOXC5Q00444 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.81□□□□□ -0.04
HOXC5Q00444 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HOXC5Q00444 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.81□□□□□ -0.04
HOXC5Q00444 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.81□□□□□ -0.04
HOXC5Q00444 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.81□□□□□ -0.04
HOXC5Q00444 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.81□□□□□ -0.04
HOXC5Q00444 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.81□□□□□ -0.04
HOXC5Q00444 AC027307.2-201ENST00000591252 911 ntBASIC14.81□□□□□ -0.04
HOXC5Q00444 SPTSSB-204ENST00000617024 1292 ntBASIC14.81□□□□□ -0.04
HOXC5Q00444 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.81□□□□□ -0.04
HOXC5Q00444 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 AC092127.1-201ENST00000567093 3455 ntBASIC14.81□□□□□ -0.04
HOXC5Q00444 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HOXC5Q00444 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC5Q00444 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.81□□□□□ -0.04
HOXC5Q00444 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC5Q00444 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.8□□□□□ -0.04
HOXC5Q00444 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms