Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM3BP58499 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.55□□□□□ -0.4
FAM3BP58499 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
FAM3BP58499 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM3BP58499 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM3BP58499 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
FAM3BP58499 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
FAM3BP58499 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 TSPY19P-201ENST00000418461 509 ntBASIC12.54□□□□□ -0.4
FAM3BP58499 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 TSPY18P-201ENST00000441642 509 ntBASIC12.54□□□□□ -0.4
FAM3BP58499 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.54□□□□□ -0.4
FAM3BP58499 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.54□□□□□ -0.4
FAM3BP58499 AC011840.4-201ENST00000578471 627 ntBASIC12.54□□□□□ -0.4
FAM3BP58499 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM3BP58499 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM3BP58499 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM3BP58499 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
FAM3BP58499 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 AC092919.2-201ENST00000623631 1645 ntBASIC12.53□□□□□ -0.4
FAM3BP58499 AC006277.1-201ENST00000624348 1610 ntBASIC12.53□□□□□ -0.4
FAM3BP58499 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 MIR648-201ENST00000385046 94 ntBASIC12.53□□□□□ -0.4
FAM3BP58499 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM3BP58499 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM3BP58499 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM3BP58499 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 DUX4L17-201ENST00000557360 1267 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms