Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AC016694.1-201ENST00000434179 700 ntBASIC13.31□□□□□ -0.28
RIPPLY3P57055 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AL157792.1-201ENST00000488281 530 ntBASIC13.31□□□□□ -0.28
RIPPLY3P57055 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AC068587.3-201ENST00000526613 355 ntBASIC13.31□□□□□ -0.28
RIPPLY3P57055 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AC133539.2-201ENST00000604757 467 ntBASIC13.31□□□□□ -0.28
RIPPLY3P57055 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.31□□□□□ -0.28
RIPPLY3P57055 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 FAM220BP-201ENST00000377689 816 ntBASIC13.3□□□□□ -0.28
RIPPLY3P57055 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 RNU1-129P-201ENST00000384064 167 ntBASIC13.3□□□□□ -0.28
RIPPLY3P57055 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 U1.21-201ENST00000580816 167 ntBASIC13.3□□□□□ -0.28
RIPPLY3P57055 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AP001505.2-201ENST00000616815 443 ntBASIC13.3□□□□□ -0.28
RIPPLY3P57055 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AC233280.19-201ENST00000633223 136 ntBASIC13.3□□□□□ -0.28
RIPPLY3P57055 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.3□□□□□ -0.28
RIPPLY3P57055 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms