Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.25■□□□□ 0.03
NR1H2P55055 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H2P55055 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.25■□□□□ 0.03
NR1H2P55055 AC073592.5-201ENST00000624854 528 ntBASIC15.25■□□□□ 0.03
NR1H2P55055 AC005593.1-201ENST00000624894 515 ntBASIC15.25■□□□□ 0.03
NR1H2P55055 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H2P55055 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NR1H2P55055 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H2P55055 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NR1H2P55055 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NR1H2P55055 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.24■□□□□ 0.03
NR1H2P55055 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.24■□□□□ 0.03
NR1H2P55055 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.24■□□□□ 0.03
NR1H2P55055 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 RNA5SP415-201ENST00000517246 115 ntBASIC15.24■□□□□ 0.03
NR1H2P55055 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H2P55055 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.24■□□□□ 0.03
NR1H2P55055 AC012640.2-201ENST00000561606 901 ntBASIC15.24■□□□□ 0.03
NR1H2P55055 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 AC004817.3-201ENST00000602957 2129 ntBASIC15.24■□□□□ 0.03
NR1H2P55055 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
NR1H2P55055 AL589182.2-201ENST00000619332 1049 ntBASIC15.24■□□□□ 0.03
NR1H2P55055 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.24■□□□□ 0.03
NR1H2P55055 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
NR1H2P55055 AC013726.1-201ENST00000563747 2285 ntBASIC15.24■□□□□ 0.03
NR1H2P55055 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H2P55055 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H2P55055 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 AL021920.2-201ENST00000624828 1351 ntBASIC15.24■□□□□ 0.03
NR1H2P55055 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H2P55055 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NR1H2P55055 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NR1H2P55055 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 AL135999.2-201ENST00000622438 1686 ntBASIC15.23■□□□□ 0.03
NR1H2P55055 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.23■□□□□ 0.03
NR1H2P55055 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.23■□□□□ 0.03
NR1H2P55055 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
NR1H2P55055 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H2P55055 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.23■□□□□ 0.03
NR1H2P55055 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.23■□□□□ 0.03
NR1H2P55055 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H2P55055 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.23■□□□□ 0.03
NR1H2P55055 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.23■□□□□ 0.03
NR1H2P55055 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H2P55055 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.23■□□□□ 0.03
NR1H2P55055 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
NR1H2P55055 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H2P55055 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.23■□□□□ 0.03
NR1H2P55055 AC034105.1-201ENST00000563488 319 ntBASIC15.23■□□□□ 0.03
NR1H2P55055 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 AL356488.2-201ENST00000602755 427 ntBASIC15.23■□□□□ 0.03
NR1H2P55055 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
NR1H2P55055 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms