Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE1AP54750 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.45■□□□□ 0.7
PDE1AP54750 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE1AP54750 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE1AP54750 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE1AP54750 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE1AP54750 AC127383.1-201ENST00000444697 1800 ntBASIC19.44■□□□□ 0.7
PDE1AP54750 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDE1AP54750 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 RPL37AP1-201ENST00000412502 279 ntBASIC19.44■□□□□ 0.7
PDE1AP54750 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE1AP54750 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE1AP54750 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE1AP54750 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 TMBIM7P-203ENST00000641617 1718 ntBASIC19.44■□□□□ 0.7
PDE1AP54750 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE1AP54750 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.44■□□□□ 0.7
PDE1AP54750 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PDE1AP54750 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE1AP54750 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE1AP54750 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE1AP54750 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.43■□□□□ 0.7
PDE1AP54750 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE1AP54750 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE1AP54750 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDE1AP54750 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.43■□□□□ 0.7
PDE1AP54750 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE1AP54750 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE1AP54750 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 AC015911.4-201ENST00000588022 1070 ntBASIC19.43■□□□□ 0.7
PDE1AP54750 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PDE1AP54750 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE1AP54750 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 CETN4P-206ENST00000642099 2168 ntBASIC19.43■□□□□ 0.7
PDE1AP54750 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDE1AP54750 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE1AP54750 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.42■□□□□ 0.7
PDE1AP54750 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDE1AP54750 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.42■□□□□ 0.7
PDE1AP54750 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PDE1AP54750 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDE1AP54750 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms