Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCT4P50991 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCT4P50991 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CCT4P50991 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CCT4P50991 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.07■□□□□ 0.8
CCT4P50991 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCT4P50991 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.07■□□□□ 0.8
CCT4P50991 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 GK-202ENST00000378941 458 ntTSL 3 BASIC20.07■□□□□ 0.8
CCT4P50991 COX5BP8-201ENST00000416911 349 ntBASIC20.07■□□□□ 0.8
CCT4P50991 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.07■□□□□ 0.8
CCT4P50991 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.07■□□□□ 0.8
CCT4P50991 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.07■□□□□ 0.8
CCT4P50991 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.07■□□□□ 0.8
CCT4P50991 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.07■□□□□ 0.8
CCT4P50991 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.07■□□□□ 0.8
CCT4P50991 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.07■□□□□ 0.8
CCT4P50991 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.07■□□□□ 0.8
CCT4P50991 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.07■□□□□ 0.8
CCT4P50991 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCT4P50991 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.07■□□□□ 0.8
CCT4P50991 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCT4P50991 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCT4P50991 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 BTBD7P1-201ENST00000447253 1453 ntBASIC20.06■□□□□ 0.8
CCT4P50991 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.06■□□□□ 0.8
CCT4P50991 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.06■□□□□ 0.8
CCT4P50991 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.06■□□□□ 0.8
CCT4P50991 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCT4P50991 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.06■□□□□ 0.8
CCT4P50991 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.06■□□□□ 0.8
CCT4P50991 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.06■□□□□ 0.8
CCT4P50991 AL132655.2-201ENST00000596276 594 ntBASIC20.06■□□□□ 0.8
CCT4P50991 AC074044.1-201ENST00000609673 707 ntBASIC20.06■□□□□ 0.8
CCT4P50991 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.06■□□□□ 0.8
CCT4P50991 AL607033.1-201ENST00000623900 1599 ntBASIC20.06■□□□□ 0.8
CCT4P50991 AL109936.8-201ENST00000641772 604 ntBASIC20.06■□□□□ 0.8
CCT4P50991 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCT4P50991 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.06■□□□□ 0.8
CCT4P50991 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCT4P50991 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCT4P50991 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CCT4P50991 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.05■□□□□ 0.8
CCT4P50991 AC074338.1-201ENST00000416825 156 ntBASIC20.05■□□□□ 0.8
CCT4P50991 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.05■□□□□ 0.8
CCT4P50991 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.05■□□□□ 0.8
CCT4P50991 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.05■□□□□ 0.8
CCT4P50991 AC135586.1-201ENST00000539323 574 ntBASIC20.05■□□□□ 0.8
CCT4P50991 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.05■□□□□ 0.8
CCT4P50991 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.05■□□□□ 0.8
CCT4P50991 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCT4P50991 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms