Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
HTR3AP46098 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.82□□□□□ -0.04
HTR3AP46098 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HTR3AP46098 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR3AP46098 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR3AP46098 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR3AP46098 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.82□□□□□ -0.04
HTR3AP46098 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.82□□□□□ -0.04
HTR3AP46098 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR3AP46098 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR3AP46098 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR3AP46098 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
HTR3AP46098 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.81□□□□□ -0.04
HTR3AP46098 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.81□□□□□ -0.04
HTR3AP46098 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.81□□□□□ -0.04
HTR3AP46098 ADH5P3-201ENST00000433842 1137 ntBASIC14.81□□□□□ -0.04
HTR3AP46098 AP000347.1-202ENST00000435868 847 ntBASIC14.81□□□□□ -0.04
HTR3AP46098 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.81□□□□□ -0.04
HTR3AP46098 IGHV3-62-201ENST00000520057 340 ntBASIC14.81□□□□□ -0.04
HTR3AP46098 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.81□□□□□ -0.04
HTR3AP46098 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
HTR3AP46098 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
HTR3AP46098 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.81□□□□□ -0.04
HTR3AP46098 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HTR3AP46098 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HTR3AP46098 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.81□□□□□ -0.04
HTR3AP46098 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
HTR3AP46098 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HTR3AP46098 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 ELL2P1-201ENST00000413990 1906 ntBASIC14.8□□□□□ -0.04
HTR3AP46098 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 AC023157.3-201ENST00000619086 2088 ntBASIC14.8□□□□□ -0.04
HTR3AP46098 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 AL603832.2-201ENST00000566195 2125 ntBASIC14.8□□□□□ -0.04
HTR3AP46098 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HTR3AP46098 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.8□□□□□ -0.04
HTR3AP46098 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.8□□□□□ -0.04
HTR3AP46098 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.8□□□□□ -0.04
HTR3AP46098 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.8□□□□□ -0.04
HTR3AP46098 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.8□□□□□ -0.04
HTR3AP46098 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.8□□□□□ -0.04
HTR3AP46098 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.8□□□□□ -0.04
HTR3AP46098 SPTSSB-204ENST00000617024 1292 ntBASIC14.8□□□□□ -0.04
HTR3AP46098 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.8□□□□□ -0.04
HTR3AP46098 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HTR3AP46098 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HTR3AP46098 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.8□□□□□ -0.04
HTR3AP46098 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms