Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SLC1A1P43005 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 CYP4F24P-201ENST00000586049 1580 ntBASIC16.72■□□□□ 0.27
SLC1A1P43005 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC1A1P43005 MKNK2P1-201ENST00000437526 628 ntBASIC16.72■□□□□ 0.27
SLC1A1P43005 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC1A1P43005 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
SLC1A1P43005 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SLC1A1P43005 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A1P43005 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A1P43005 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A1P43005 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A1P43005 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 DBET-201ENST00000630918 3363 ntBASIC16.71■□□□□ 0.27
SLC1A1P43005 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 AC138035.3-201ENST00000622706 2791 ntBASIC16.71■□□□□ 0.27
SLC1A1P43005 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A1P43005 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A1P43005 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A1P43005 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A1P43005 AC004832.2-201ENST00000426397 482 ntBASIC16.71■□□□□ 0.27
SLC1A1P43005 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A1P43005 PHKG1P2-201ENST00000457537 863 ntBASIC16.71■□□□□ 0.27
SLC1A1P43005 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC1A1P43005 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A1P43005 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A1P43005 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SLC1A1P43005 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms