Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
APOBEC1P41238 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBEC1P41238 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBEC1P41238 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOBEC1P41238 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
APOBEC1P41238 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
APOBEC1P41238 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBEC1P41238 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOBEC1P41238 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.44□□□□□ -0.1
APOBEC1P41238 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBEC1P41238 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
APOBEC1P41238 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBEC1P41238 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.43□□□□□ -0.1
APOBEC1P41238 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOBEC1P41238 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
APOBEC1P41238 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.43□□□□□ -0.1
APOBEC1P41238 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
APOBEC1P41238 AL513477.1-201ENST00000602865 2407 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
APOBEC1P41238 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.43□□□□□ -0.1
APOBEC1P41238 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
APOBEC1P41238 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOBEC1P41238 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.43□□□□□ -0.1
APOBEC1P41238 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.43□□□□□ -0.1
APOBEC1P41238 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 SERBP1P3-201ENST00000459980 809 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.43□□□□□ -0.1
APOBEC1P41238 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 AC069120.2-201ENST00000524091 540 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.43□□□□□ -0.1
APOBEC1P41238 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.43□□□□□ -0.1
APOBEC1P41238 AC140878.1-201ENST00000565277 250 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 AC051619.7-201ENST00000568314 623 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.43□□□□□ -0.1
APOBEC1P41238 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.43□□□□□ -0.1
APOBEC1P41238 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.43□□□□□ -0.1
APOBEC1P41238 MIR6069-201ENST00000620069 79 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 AC093028.1-201ENST00000622998 982 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.43□□□□□ -0.1
APOBEC1P41238 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 FO538757.1-201ENST00000623083 1397 ntBASIC14.43□□□□□ -0.1
APOBEC1P41238 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.43□□□□□ -0.1
APOBEC1P41238 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBEC1P41238 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 AC068587.6-202ENST00000641839 5619 ntBASIC14.42□□□□□ -0.1
APOBEC1P41238 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
APOBEC1P41238 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
APOBEC1P41238 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.42□□□□□ -0.1
APOBEC1P41238 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
APOBEC1P41238 AC107890.1-201ENST00000422478 521 ntBASIC14.42□□□□□ -0.1
APOBEC1P41238 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.42□□□□□ -0.1
APOBEC1P41238 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms