Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.49■□□□□ 0.39
USP8P40818 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP8P40818 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.49■□□□□ 0.39
USP8P40818 TFAMP1-201ENST00000412727 736 ntBASIC17.49■□□□□ 0.39
USP8P40818 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 PGAM5P1-201ENST00000518923 814 ntBASIC17.49■□□□□ 0.39
USP8P40818 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.49■□□□□ 0.39
USP8P40818 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.49■□□□□ 0.39
USP8P40818 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 AC092902.6-201ENST00000641783 218 ntBASIC17.49■□□□□ 0.39
USP8P40818 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.49■□□□□ 0.39
USP8P40818 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP8P40818 CDC14C-201ENST00000428251 1719 ntBASIC17.49■□□□□ 0.39
USP8P40818 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.49■□□□□ 0.39
USP8P40818 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.49■□□□□ 0.39
USP8P40818 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP8P40818 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.49■□□□□ 0.39
USP8P40818 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP8P40818 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.48■□□□□ 0.39
USP8P40818 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
USP8P40818 AL589702.1-201ENST00000641229 1509 ntBASIC17.48■□□□□ 0.39
USP8P40818 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.48■□□□□ 0.39
USP8P40818 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.48■□□□□ 0.39
USP8P40818 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.48■□□□□ 0.39
USP8P40818 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 AL355306.1-201ENST00000415580 579 ntBASIC17.48■□□□□ 0.39
USP8P40818 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 AL135744.1-201ENST00000565098 629 ntBASIC17.48■□□□□ 0.39
USP8P40818 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.48■□□□□ 0.39
USP8P40818 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.48■□□□□ 0.39
USP8P40818 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP8P40818 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.48■□□□□ 0.39
USP8P40818 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP8P40818 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.48■□□□□ 0.39
USP8P40818 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP8P40818 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.48■□□□□ 0.39
USP8P40818 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP8P40818 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.47■□□□□ 0.39
USP8P40818 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP8P40818 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP8P40818 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.47■□□□□ 0.39
USP8P40818 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.47■□□□□ 0.39
USP8P40818 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms