Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN1P35523 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN1P35523 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN1P35523 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN1P35523 SCARNA2-201ENST00000458748 420 ntBASIC18.24■□□□□ 0.51
CLCN1P35523 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN1P35523 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN1P35523 AC139887.3-201ENST00000568585 713 ntBASIC18.24■□□□□ 0.51
CLCN1P35523 LINC01711-201ENST00000598340 967 ntBASIC18.24■□□□□ 0.51
CLCN1P35523 TERC-201ENST00000602385 541 ntBASIC18.24■□□□□ 0.51
CLCN1P35523 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN1P35523 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN1P35523 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CLCN1P35523 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CLCN1P35523 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN1P35523 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 AC112693.3-201ENST00000624819 1983 ntBASIC18.23■□□□□ 0.51
CLCN1P35523 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.23■□□□□ 0.51
CLCN1P35523 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN1P35523 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN1P35523 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 EMBP1-201ENST00000458200 901 ntBASIC18.23■□□□□ 0.51
CLCN1P35523 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN1P35523 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN1P35523 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.23■□□□□ 0.51
CLCN1P35523 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.23■□□□□ 0.51
CLCN1P35523 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN1P35523 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN1P35523 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLCN1P35523 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN1P35523 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN1P35523 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLCN1P35523 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLCN1P35523 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN1P35523 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 MIR648-201ENST00000385046 94 ntBASIC18.22■□□□□ 0.51
CLCN1P35523 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN1P35523 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN1P35523 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.22■□□□□ 0.51
CLCN1P35523 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN1P35523 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLCN1P35523 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN1P35523 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLCN1P35523 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN1P35523 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN1P35523 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 AP003680.1-201ENST00000598970 3660 ntBASIC18.21■□□□□ 0.51
CLCN1P35523 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN1P35523 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CLCN1P35523 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms