Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
SHC1P29353 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.7□□□□□ -0.06
SHC1P29353 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.7□□□□□ -0.06
SHC1P29353 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 AL592424.1-201ENST00000563624 1536 ntBASIC14.7□□□□□ -0.06
SHC1P29353 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.7□□□□□ -0.06
SHC1P29353 PKD1P5-201ENST00000532415 10291 ntBASIC14.7□□□□□ -0.06
SHC1P29353 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SHC1P29353 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.7□□□□□ -0.06
SHC1P29353 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHC1P29353 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 U82695.1-201ENST00000635752 1889 ntBASIC14.69□□□□□ -0.06
SHC1P29353 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 LINC02228-204ENST00000642115 2962 ntBASIC14.69□□□□□ -0.06
SHC1P29353 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.69□□□□□ -0.06
SHC1P29353 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.69□□□□□ -0.06
SHC1P29353 METTL21AP1-201ENST00000438852 635 ntBASIC14.69□□□□□ -0.06
SHC1P29353 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 AC092183.1-201ENST00000469884 875 ntBASIC14.69□□□□□ -0.06
SHC1P29353 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.69□□□□□ -0.06
SHC1P29353 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 ALG1L8P-201ENST00000533887 760 ntBASIC14.69□□□□□ -0.06
SHC1P29353 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.69□□□□□ -0.06
SHC1P29353 AC026150.2-201ENST00000564693 1156 ntBASIC14.69□□□□□ -0.06
SHC1P29353 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 LINC00628-201ENST00000628516 1289 ntBASIC14.69□□□□□ -0.06
SHC1P29353 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
SHC1P29353 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SHC1P29353 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHC1P29353 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 KRT18P28-201ENST00000453838 1332 ntBASIC14.68□□□□□ -0.06
SHC1P29353 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SHC1P29353 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.68□□□□□ -0.06
SHC1P29353 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHC1P29353 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.68□□□□□ -0.06
SHC1P29353 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.68□□□□□ -0.06
SHC1P29353 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.68□□□□□ -0.06
SHC1P29353 AC093028.1-201ENST00000622998 982 ntBASIC14.68□□□□□ -0.06
SHC1P29353 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms