Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
VARSP26640 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC15.79■□□□□ 0.12
VARSP26640 PRYP6-201ENST00000514804 343 ntBASIC15.79■□□□□ 0.12
VARSP26640 RNA5SP421-201ENST00000516864 134 ntBASIC15.79■□□□□ 0.12
VARSP26640 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.79■□□□□ 0.12
VARSP26640 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VARSP26640 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 U82695.1-201ENST00000635752 1889 ntBASIC15.79■□□□□ 0.12
VARSP26640 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 CDC14C-201ENST00000428251 1719 ntBASIC15.79■□□□□ 0.12
VARSP26640 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.79■□□□□ 0.12
VARSP26640 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARSP26640 SNX18-202ENST00000343017 3140 ntBASIC15.79■□□□□ 0.12
VARSP26640 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.79■□□□□ 0.12
VARSP26640 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VARSP26640 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.78■□□□□ 0.12
VARSP26640 AP005117.1-202ENST00000581724 1908 ntBASIC15.78■□□□□ 0.12
VARSP26640 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 TFAMP1-201ENST00000412727 736 ntBASIC15.78■□□□□ 0.12
VARSP26640 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.78■□□□□ 0.12
VARSP26640 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 AC067863.1-201ENST00000494933 530 ntBASIC15.78■□□□□ 0.12
VARSP26640 LINC02447-202ENST00000501888 2146 ntBASIC15.78■□□□□ 0.12
VARSP26640 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
VARSP26640 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.78■□□□□ 0.12
VARSP26640 AL135744.1-201ENST00000565098 629 ntBASIC15.78■□□□□ 0.12
VARSP26640 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VARSP26640 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.78■□□□□ 0.12
VARSP26640 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.78■□□□□ 0.12
VARSP26640 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.78■□□□□ 0.12
VARSP26640 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VARSP26640 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
VARSP26640 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.78■□□□□ 0.12
VARSP26640 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARSP26640 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.78■□□□□ 0.12
VARSP26640 AC112504.1-201ENST00000623415 1841 ntBASIC15.78■□□□□ 0.12
VARSP26640 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.77■□□□□ 0.12
VARSP26640 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.77■□□□□ 0.12
VARSP26640 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.77■□□□□ 0.12
VARSP26640 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.77■□□□□ 0.12
VARSP26640 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.77■□□□□ 0.12
VARSP26640 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.77■□□□□ 0.12
VARSP26640 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 AL035633.1-201ENST00000406139 838 ntBASIC15.77■□□□□ 0.12
VARSP26640 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
VARSP26640 ADH5P3-201ENST00000433842 1137 ntBASIC15.77■□□□□ 0.12
VARSP26640 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.77■□□□□ 0.12
VARSP26640 HLA-J-203ENST00000494367 1087 ntBASIC15.77■□□□□ 0.12
VARSP26640 MTND2P7-201ENST00000521337 640 ntBASIC15.77■□□□□ 0.12
VARSP26640 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.77■□□□□ 0.12
VARSP26640 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms