Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.49□□□□□ -0.25
COL8A2P25067 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.49□□□□□ -0.25
COL8A2P25067 AC005034.1-201ENST00000426657 489 ntBASIC13.49□□□□□ -0.25
COL8A2P25067 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.49□□□□□ -0.25
COL8A2P25067 AC245100.5-201ENST00000452108 331 ntBASIC13.49□□□□□ -0.25
COL8A2P25067 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.49□□□□□ -0.25
COL8A2P25067 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 API5-211ENST00000534695 560 ntTSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.49□□□□□ -0.25
COL8A2P25067 AC005225.4-201ENST00000557330 545 ntBASIC13.49□□□□□ -0.25
COL8A2P25067 SRD5A3P1-201ENST00000603021 949 ntBASIC13.49□□□□□ -0.25
COL8A2P25067 AC239800.4-201ENST00000603712 296 ntBASIC13.49□□□□□ -0.25
COL8A2P25067 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 BNIP3P1-202ENST00000550043 1585 ntBASIC13.49□□□□□ -0.25
COL8A2P25067 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.49□□□□□ -0.25
COL8A2P25067 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
COL8A2P25067 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.49□□□□□ -0.25
COL8A2P25067 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COL8A2P25067 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.48□□□□□ -0.25
COL8A2P25067 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.48□□□□□ -0.25
COL8A2P25067 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 AL589987.1-201ENST00000453380 819 ntBASIC13.48□□□□□ -0.25
COL8A2P25067 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.48□□□□□ -0.25
COL8A2P25067 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.48□□□□□ -0.25
COL8A2P25067 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.48□□□□□ -0.25
COL8A2P25067 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.48□□□□□ -0.25
COL8A2P25067 AL035252.4-201ENST00000624174 288 ntBASIC13.48□□□□□ -0.25
COL8A2P25067 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms