Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TNFSF4P23510 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 MIR943-201ENST00000401286 94 ntBASIC13.71□□□□□ -0.21
TNFSF4P23510 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.71□□□□□ -0.21
TNFSF4P23510 SERBP1P3-201ENST00000459980 809 ntBASIC13.71□□□□□ -0.21
TNFSF4P23510 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.71□□□□□ -0.21
TNFSF4P23510 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.71□□□□□ -0.21
TNFSF4P23510 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 AL158211.3-201ENST00000607385 239 ntBASIC13.71□□□□□ -0.21
TNFSF4P23510 AC093512.1-201ENST00000617969 520 ntBASIC13.71□□□□□ -0.21
TNFSF4P23510 AC073592.8-201ENST00000624126 511 ntBASIC13.71□□□□□ -0.21
TNFSF4P23510 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
TNFSF4P23510 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TNFSF4P23510 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TNFSF4P23510 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.71□□□□□ -0.22
TNFSF4P23510 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.71□□□□□ -0.22
TNFSF4P23510 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TNFSF4P23510 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TNFSF4P23510 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TNFSF4P23510 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.71□□□□□ -0.22
TNFSF4P23510 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TNFSF4P23510 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TNFSF4P23510 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
TNFSF4P23510 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.7□□□□□ -0.22
TNFSF4P23510 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TNFSF4P23510 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.7□□□□□ -0.22
TNFSF4P23510 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 AC004987.2-201ENST00000395959 1148 ntBASIC13.7□□□□□ -0.22
TNFSF4P23510 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.7□□□□□ -0.22
TNFSF4P23510 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TNFSF4P23510 CYMP-203ENST00000474680 1263 ntBASIC13.7□□□□□ -0.22
TNFSF4P23510 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.7□□□□□ -0.22
TNFSF4P23510 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TNFSF4P23510 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TNFSF4P23510 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TNFSF4P23510 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TNFSF4P23510 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TNFSF4P23510 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TNFSF4P23510 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.69□□□□□ -0.22
TNFSF4P23510 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 CYP2T1P-202ENST00000641596 2535 ntBASIC13.69□□□□□ -0.22
TNFSF4P23510 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms