Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.13■□□□□ 0.17
XPAP23025 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
XPAP23025 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.12■□□□□ 0.17
XPAP23025 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.12■□□□□ 0.17
XPAP23025 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.12■□□□□ 0.17
XPAP23025 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.12■□□□□ 0.17
XPAP23025 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.12■□□□□ 0.17
XPAP23025 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.12■□□□□ 0.17
XPAP23025 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
XPAP23025 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.11■□□□□ 0.17
XPAP23025 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
XPAP23025 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.11■□□□□ 0.17
XPAP23025 FO393414.2-201ENST00000405153 598 ntBASIC16.11■□□□□ 0.17
XPAP23025 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.11■□□□□ 0.17
XPAP23025 UGT1A2P-201ENST00000454886 866 ntBASIC16.11■□□□□ 0.17
XPAP23025 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.11■□□□□ 0.17
XPAP23025 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.11■□□□□ 0.17
XPAP23025 TERF1P3-201ENST00000505638 1227 ntBASIC16.11■□□□□ 0.17
XPAP23025 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 AC009118.2-201ENST00000613275 655 ntBASIC16.11■□□□□ 0.17
XPAP23025 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
XPAP23025 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.11■□□□□ 0.17
XPAP23025 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
XPAP23025 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.11■□□□□ 0.17
XPAP23025 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
XPAP23025 KRT8P37-201ENST00000451609 1420 ntBASIC16.11■□□□□ 0.17
XPAP23025 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
XPAP23025 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
XPAP23025 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.1■□□□□ 0.17
XPAP23025 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.1■□□□□ 0.17
XPAP23025 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.1■□□□□ 0.17
XPAP23025 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
XPAP23025 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
XPAP23025 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.1■□□□□ 0.17
XPAP23025 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
XPAP23025 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 AL596087.1-201ENST00000400979 1969 ntBASIC16.1■□□□□ 0.17
XPAP23025 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
XPAP23025 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms