Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.25■□□□□ 0.19
NFKB1P19838 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.25■□□□□ 0.19
NFKB1P19838 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.25■□□□□ 0.19
NFKB1P19838 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
NFKB1P19838 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NFKB1P19838 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.25■□□□□ 0.19
NFKB1P19838 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NFKB1P19838 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFKB1P19838 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.24■□□□□ 0.19
NFKB1P19838 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
NFKB1P19838 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.24■□□□□ 0.19
NFKB1P19838 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.24■□□□□ 0.19
NFKB1P19838 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NFKB1P19838 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 MIR4453-201ENST00000584019 89 ntBASIC16.24■□□□□ 0.19
NFKB1P19838 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 AC007967.4-201ENST00000614700 386 ntBASIC16.24■□□□□ 0.19
NFKB1P19838 AP001059.3-201ENST00000619053 235 ntBASIC16.24■□□□□ 0.19
NFKB1P19838 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.24■□□□□ 0.19
NFKB1P19838 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.24■□□□□ 0.19
NFKB1P19838 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFKB1P19838 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.24■□□□□ 0.19
NFKB1P19838 AC092127.1-201ENST00000567093 3455 ntBASIC16.24■□□□□ 0.19
NFKB1P19838 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NFKB1P19838 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.23■□□□□ 0.19
NFKB1P19838 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NFKB1P19838 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NFKB1P19838 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.23■□□□□ 0.19
NFKB1P19838 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NFKB1P19838 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.23■□□□□ 0.19
NFKB1P19838 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.23■□□□□ 0.19
NFKB1P19838 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
NFKB1P19838 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 MIR4313-201ENST00000580760 101 ntBASIC16.23■□□□□ 0.19
NFKB1P19838 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 AL450472.2-201ENST00000603663 1156 ntBASIC16.23■□□□□ 0.19
NFKB1P19838 AL691403.2-201ENST00000618460 490 ntBASIC16.23■□□□□ 0.19
NFKB1P19838 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms