Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SYN1P17600 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.18■□□□□ 0.34
SYN1P17600 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.18■□□□□ 0.34
SYN1P17600 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SYN1P17600 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYN1P17600 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYN1P17600 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYN1P17600 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SYN1P17600 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.17■□□□□ 0.34
SYN1P17600 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.17■□□□□ 0.34
SYN1P17600 AC090340.1-201ENST00000620778 4980 ntBASIC17.17■□□□□ 0.34
SYN1P17600 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.17■□□□□ 0.34
SYN1P17600 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.17■□□□□ 0.34
SYN1P17600 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.17■□□□□ 0.34
SYN1P17600 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.17■□□□□ 0.34
SYN1P17600 SERPINA13P-202ENST00000478994 924 ntBASIC17.17■□□□□ 0.34
SYN1P17600 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.17■□□□□ 0.34
SYN1P17600 NUP210P1-202ENST00000504322 710 ntBASIC17.17■□□□□ 0.34
SYN1P17600 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.17■□□□□ 0.34
SYN1P17600 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SYN1P17600 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.17■□□□□ 0.34
SYN1P17600 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SYN1P17600 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
SYN1P17600 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYN1P17600 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.17■□□□□ 0.34
SYN1P17600 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SYN1P17600 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.17■□□□□ 0.34
SYN1P17600 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 PP12613-201ENST00000424958 2230 ntBASIC17.16■□□□□ 0.34
SYN1P17600 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SYN1P17600 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SYN1P17600 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SYN1P17600 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.16■□□□□ 0.34
SYN1P17600 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.16■□□□□ 0.34
SYN1P17600 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.16■□□□□ 0.34
SYN1P17600 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.16■□□□□ 0.34
SYN1P17600 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.16■□□□□ 0.34
SYN1P17600 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.16■□□□□ 0.34
SYN1P17600 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SYN1P17600 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.16■□□□□ 0.34
SYN1P17600 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYN1P17600 AC008132.1-202ENST00000342005 1389 ntBASIC17.15■□□□□ 0.34
SYN1P17600 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SYN1P17600 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SYN1P17600 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 RPL13AP19-201ENST00000434320 584 ntBASIC17.15■□□□□ 0.34
SYN1P17600 KRT18P43-201ENST00000469825 1281 ntBASIC17.15■□□□□ 0.34
SYN1P17600 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.15■□□□□ 0.34
SYN1P17600 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.15■□□□□ 0.34
SYN1P17600 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.15■□□□□ 0.34
SYN1P17600 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.15■□□□□ 0.34
SYN1P17600 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.15■□□□□ 0.34
SYN1P17600 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.15■□□□□ 0.34
SYN1P17600 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms