Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF7P17544 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.53■□□□□ 0.4
ATF7P17544 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.53■□□□□ 0.4
ATF7P17544 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.53■□□□□ 0.4
ATF7P17544 HIST3H2BA-201ENST00000436555 524 ntBASIC17.53■□□□□ 0.4
ATF7P17544 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.53■□□□□ 0.4
ATF7P17544 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF7P17544 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.53■□□□□ 0.4
ATF7P17544 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF7P17544 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.53■□□□□ 0.4
ATF7P17544 SRD5A3P1-201ENST00000603021 949 ntBASIC17.53■□□□□ 0.4
ATF7P17544 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.53■□□□□ 0.4
ATF7P17544 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF7P17544 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF7P17544 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
ATF7P17544 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF7P17544 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.53■□□□□ 0.4
ATF7P17544 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.53■□□□□ 0.4
ATF7P17544 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF7P17544 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATF7P17544 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ATF7P17544 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.52■□□□□ 0.4
ATF7P17544 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ATF7P17544 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ATF7P17544 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATF7P17544 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.52■□□□□ 0.4
ATF7P17544 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATF7P17544 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.52■□□□□ 0.4
ATF7P17544 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATF7P17544 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 AC093004.1-201ENST00000508850 424 ntBASIC17.52■□□□□ 0.4
ATF7P17544 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.52■□□□□ 0.4
ATF7P17544 SDHAP3-202ENST00000515467 728 ntBASIC17.52■□□□□ 0.4
ATF7P17544 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ATF7P17544 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.52■□□□□ 0.4
ATF7P17544 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ATF7P17544 AC008894.3-201ENST00000624324 3103 ntBASIC17.52■□□□□ 0.4
ATF7P17544 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.52■□□□□ 0.4
ATF7P17544 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF7P17544 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATF7P17544 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATF7P17544 CYP4F24P-201ENST00000586049 1580 ntBASIC17.52■□□□□ 0.39
ATF7P17544 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ATF7P17544 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATF7P17544 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.52■□□□□ 0.39
ATF7P17544 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATF7P17544 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATF7P17544 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.52■□□□□ 0.39
ATF7P17544 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 AC138969.3-201ENST00000546612 1459 ntBASIC17.51■□□□□ 0.39
ATF7P17544 AC138932.2-201ENST00000548268 1459 ntBASIC17.51■□□□□ 0.39
ATF7P17544 AC126755.4-201ENST00000549796 1459 ntBASIC17.51■□□□□ 0.39
ATF7P17544 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF7P17544 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF7P17544 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF7P17544 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATF7P17544 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ATF7P17544 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF7P17544 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATF7P17544 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.51■□□□□ 0.39
ATF7P17544 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ATF7P17544 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF7P17544 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF7P17544 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.51■□□□□ 0.39
ATF7P17544 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF7P17544 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms