Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHAP12694 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHAP12694 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHAP12694 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
BCKDHAP12694 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHAP12694 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHAP12694 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHAP12694 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHAP12694 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
BCKDHAP12694 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHAP12694 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHAP12694 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHAP12694 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.28■□□□□ 0.04
BCKDHAP12694 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.28■□□□□ 0.04
BCKDHAP12694 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 FAM220BP-201ENST00000377689 816 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.28■□□□□ 0.04
BCKDHAP12694 AC023274.1-201ENST00000418278 595 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.28■□□□□ 0.04
BCKDHAP12694 RPS8P6-201ENST00000426177 609 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 ADH5P3-201ENST00000433842 1137 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.28■□□□□ 0.04
BCKDHAP12694 FAM58CP-201ENST00000435741 640 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.28■□□□□ 0.04
BCKDHAP12694 RNA5SP410-201ENST00000516285 106 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.28■□□□□ 0.04
BCKDHAP12694 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
BCKDHAP12694 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.28■□□□□ 0.04
BCKDHAP12694 AL121894.2-201ENST00000602977 491 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.28■□□□□ 0.04
BCKDHAP12694 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
BCKDHAP12694 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.28■□□□□ 0.04
BCKDHAP12694 AC009090.5-201ENST00000624886 2285 ntBASIC15.28■□□□□ 0.04
BCKDHAP12694 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHAP12694 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHAP12694 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHAP12694 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BCKDHAP12694 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
BCKDHAP12694 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHAP12694 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 NORAD-201ENST00000565493 5339 ntBASIC15.27■□□□□ 0.04
BCKDHAP12694 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BCKDHAP12694 AL136982.4-201ENST00000437689 1740 ntBASIC15.27■□□□□ 0.04
BCKDHAP12694 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
BCKDHAP12694 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHAP12694 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHAP12694 AC004987.2-201ENST00000395959 1148 ntBASIC15.27■□□□□ 0.04
BCKDHAP12694 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.27■□□□□ 0.04
BCKDHAP12694 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.27■□□□□ 0.04
BCKDHAP12694 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
BCKDHAP12694 RN7SL589P-201ENST00000481268 310 ntBASIC15.27■□□□□ 0.04
BCKDHAP12694 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.27■□□□□ 0.04
BCKDHAP12694 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.27■□□□□ 0.04
BCKDHAP12694 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.27■□□□□ 0.04
BCKDHAP12694 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHAP12694 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.27■□□□□ 0.04
BCKDHAP12694 AC243562.1-201ENST00000560672 389 ntBASIC15.27■□□□□ 0.04
BCKDHAP12694 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.27■□□□□ 0.04
BCKDHAP12694 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHAP12694 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
BCKDHAP12694 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms