Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
TOP2AP11388 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC27.27■■□□□ 1.96
TOP2AP11388 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
TOP2AP11388 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
TOP2AP11388 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
TOP2AP11388 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
TOP2AP11388 SMS-201ENST00000379404 1174 ntTSL 3 BASIC27.26■■□□□ 1.96
TOP2AP11388 LSM5-207ENST00000410044 687 ntTSL 3 BASIC27.26■■□□□ 1.96
TOP2AP11388 NUS1P3-201ENST00000423502 862 ntBASIC27.26■■□□□ 1.96
TOP2AP11388 HIST2H2BB-201ENST00000449108 381 ntBASIC27.26■■□□□ 1.96
TOP2AP11388 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
TOP2AP11388 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
TOP2AP11388 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC27.26■■□□□ 1.96
TOP2AP11388 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
TOP2AP11388 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 AMT-224ENST00000635808 1610 ntTSL 5 BASIC27.26■■□□□ 1.95
TOP2AP11388 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
TOP2AP11388 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC27.26■■□□□ 1.95
TOP2AP11388 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
TOP2AP11388 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC27.26■■□□□ 1.95
TOP2AP11388 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
TOP2AP11388 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC27.26■■□□□ 1.95
TOP2AP11388 AL158070.2-201ENST00000623713 1621 ntBASIC27.26■■□□□ 1.95
TOP2AP11388 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 AL645937.2-201ENST00000396808 931 ntBASIC27.26■■□□□ 1.95
TOP2AP11388 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC27.26■■□□□ 1.95
TOP2AP11388 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC27.26■■□□□ 1.95
TOP2AP11388 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TOP2AP11388 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC27.26■■□□□ 1.95
TOP2AP11388 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TOP2AP11388 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TOP2AP11388 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TOP2AP11388 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC27.25■■□□□ 1.95
TOP2AP11388 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TOP2AP11388 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC27.25■■□□□ 1.95
TOP2AP11388 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TOP2AP11388 FXNP2-201ENST00000411625 547 ntBASIC27.25■■□□□ 1.95
TOP2AP11388 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC27.25■■□□□ 1.95
TOP2AP11388 UPF3AP2-201ENST00000457924 1132 ntBASIC27.25■■□□□ 1.95
TOP2AP11388 AL391280.1-201ENST00000506969 1062 ntBASIC27.25■■□□□ 1.95
TOP2AP11388 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC27.25■■□□□ 1.95
TOP2AP11388 AC097724.1-201ENST00000609581 426 ntBASIC27.25■■□□□ 1.95
TOP2AP11388 ZACNP1-201ENST00000612259 710 ntBASIC27.25■■□□□ 1.95
TOP2AP11388 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC27.25■■□□□ 1.95
TOP2AP11388 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC27.24■■□□□ 1.95
TOP2AP11388 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC27.24■■□□□ 1.95
TOP2AP11388 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
TOP2AP11388 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
TOP2AP11388 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TOP2AP11388 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
TOP2AP11388 FAM8A4P-201ENST00000435433 1213 ntBASIC27.24■■□□□ 1.95
TOP2AP11388 FOS-206ENST00000555347 1280 ntTSL 2 BASIC27.24■■□□□ 1.95
TOP2AP11388 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
TOP2AP11388 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TOP2AP11388 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TOP2AP11388 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC27.24■■□□□ 1.95
TOP2AP11388 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC27.23■■□□□ 1.95
TOP2AP11388 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
TOP2AP11388 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC27.23■■□□□ 1.95
TOP2AP11388 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
TOP2AP11388 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 AC104457.1-201ENST00000401024 814 ntBASIC27.23■■□□□ 1.95
TOP2AP11388 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC27.23■■□□□ 1.95
TOP2AP11388 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 AC022217.1-201ENST00000521069 738 ntBASIC27.23■■□□□ 1.95
TOP2AP11388 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC27.23■■□□□ 1.95
TOP2AP11388 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC27.23■■□□□ 1.95
TOP2AP11388 LRRC59-203ENST00000576448 1531 ntBASIC27.23■■□□□ 1.95
TOP2AP11388 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TOP2AP11388 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
TOP2AP11388 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
TOP2AP11388 AL662890.1-201ENST00000396818 632 ntBASIC27.22■■□□□ 1.95
TOP2AP11388 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms