Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.15■□□□□ 0.02
LAMP1P11279 AC006486.2-201ENST00000624246 2199 ntBASIC15.15■□□□□ 0.02
LAMP1P11279 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.15■□□□□ 0.02
LAMP1P11279 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.15■□□□□ 0.02
LAMP1P11279 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LAMP1P11279 AC004987.2-201ENST00000395959 1148 ntBASIC15.15■□□□□ 0.02
LAMP1P11279 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.15■□□□□ 0.02
LAMP1P11279 RPS8P6-201ENST00000426177 609 ntBASIC15.15■□□□□ 0.02
LAMP1P11279 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.15■□□□□ 0.02
LAMP1P11279 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.15■□□□□ 0.02
LAMP1P11279 AL109954.1-202ENST00000564051 2148 ntBASIC15.15■□□□□ 0.02
LAMP1P11279 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LAMP1P11279 NORAD-201ENST00000565493 5339 ntBASIC15.15■□□□□ 0.02
LAMP1P11279 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LAMP1P11279 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LAMP1P11279 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.15■□□□□ 0.02
LAMP1P11279 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.15■□□□□ 0.02
LAMP1P11279 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.15■□□□□ 0.02
LAMP1P11279 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LAMP1P11279 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LAMP1P11279 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.14■□□□□ 0.01
LAMP1P11279 AC138035.3-201ENST00000622706 2791 ntBASIC15.14■□□□□ 0.01
LAMP1P11279 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.14■□□□□ 0.01
LAMP1P11279 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.14■□□□□ 0.01
LAMP1P11279 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 YBX2P1-201ENST00000394192 760 ntBASIC15.14■□□□□ 0.01
LAMP1P11279 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.14■□□□□ 0.01
LAMP1P11279 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 POLD2P1-201ENST00000511220 997 ntBASIC15.14■□□□□ 0.01
LAMP1P11279 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 PGAM5P1-201ENST00000518923 814 ntBASIC15.14■□□□□ 0.01
LAMP1P11279 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.14■□□□□ 0.01
LAMP1P11279 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.14■□□□□ 0.01
LAMP1P11279 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LAMP1P11279 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.14■□□□□ 0.01
LAMP1P11279 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LAMP1P11279 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.13■□□□□ 0.01
LAMP1P11279 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms