Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 SSR4P1-203ENST00000599569 2260 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 YBX2P1-201ENST00000394192 760 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 SPDYE11-202ENST00000450699 704 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 KRT18P58-201ENST00000527480 1120 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 SPDYE9P-201ENST00000570642 692 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 SPDYE10P-202ENST00000612005 668 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 SPDYE8P-202ENST00000612377 668 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 AC020658.6-201ENST00000623564 1870 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 AC013268.4-201ENST00000637413 2228 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 AC136621.1-201ENST00000624017 2304 ntBASIC12.9□□□□□ -0.34
SAA1P0DJI8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SAA1P0DJI8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.9□□□□□ -0.34
SAA1P0DJI8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SAA1P0DJI8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.9□□□□□ -0.35
SAA1P0DJI8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
SAA1P0DJI8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.9□□□□□ -0.35
SAA1P0DJI8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.9□□□□□ -0.35
SAA1P0DJI8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SAA1P0DJI8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SAA1P0DJI8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.89□□□□□ -0.35
SAA1P0DJI8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.89□□□□□ -0.35
SAA1P0DJI8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 MCCD1P2-201ENST00000423228 335 ntBASIC12.89□□□□□ -0.35
SAA1P0DJI8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 AC243562.1-201ENST00000560672 389 ntBASIC12.89□□□□□ -0.35
SAA1P0DJI8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 AC026120.1-201ENST00000611536 926 ntBASIC12.89□□□□□ -0.35
SAA1P0DJI8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.89□□□□□ -0.35
SAA1P0DJI8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SAA1P0DJI8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms