Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.51■□□□□ 0.39
CLTAP09496 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLTAP09496 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLTAP09496 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 AC087499.5-201ENST00000452760 1342 ntBASIC17.5■□□□□ 0.39
CLTAP09496 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLTAP09496 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLTAP09496 AC004987.2-201ENST00000395959 1148 ntBASIC17.5■□□□□ 0.39
CLTAP09496 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.5■□□□□ 0.39
CLTAP09496 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.5■□□□□ 0.39
CLTAP09496 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.5■□□□□ 0.39
CLTAP09496 AC004890.2-204ENST00000481968 304 ntBASIC17.5■□□□□ 0.39
CLTAP09496 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.5■□□□□ 0.39
CLTAP09496 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.5■□□□□ 0.39
CLTAP09496 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.5■□□□□ 0.39
CLTAP09496 AJ011932.1-201ENST00000621707 465 ntBASIC17.5■□□□□ 0.39
CLTAP09496 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.5■□□□□ 0.39
CLTAP09496 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLTAP09496 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.5■□□□□ 0.39
CLTAP09496 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLTAP09496 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.5■□□□□ 0.39
CLTAP09496 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CLTAP09496 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.49■□□□□ 0.39
CLTAP09496 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.49■□□□□ 0.39
CLTAP09496 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.49■□□□□ 0.39
CLTAP09496 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.49■□□□□ 0.39
CLTAP09496 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.49■□□□□ 0.39
CLTAP09496 HAUS4P1-201ENST00000406739 1145 ntBASIC17.49■□□□□ 0.39
CLTAP09496 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLTAP09496 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.49■□□□□ 0.39
CLTAP09496 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.49■□□□□ 0.39
CLTAP09496 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.49■□□□□ 0.39
CLTAP09496 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.49■□□□□ 0.39
CLTAP09496 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLTAP09496 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.49■□□□□ 0.39
CLTAP09496 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.49■□□□□ 0.39
CLTAP09496 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.49■□□□□ 0.39
CLTAP09496 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.49■□□□□ 0.39
CLTAP09496 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLTAP09496 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.49■□□□□ 0.39
CLTAP09496 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLTAP09496 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.49■□□□□ 0.39
CLTAP09496 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLTAP09496 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLTAP09496 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CLTAP09496 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms