Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT6AP02538 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT6AP02538 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.53■□□□□ 0.08
KRT6AP02538 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.53■□□□□ 0.08
KRT6AP02538 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.53■□□□□ 0.08
KRT6AP02538 AL121894.2-201ENST00000602977 491 ntBASIC15.53■□□□□ 0.08
KRT6AP02538 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
KRT6AP02538 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT6AP02538 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT6AP02538 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT6AP02538 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT6AP02538 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 LINC02228-204ENST00000642115 2962 ntBASIC15.52■□□□□ 0.08
KRT6AP02538 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
KRT6AP02538 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT6AP02538 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 PCDHA3-202ENST00000532566 4594 ntBASIC15.52■□□□□ 0.08
KRT6AP02538 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT6AP02538 FAM58CP-201ENST00000435741 640 ntBASIC15.52■□□□□ 0.08
KRT6AP02538 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.52■□□□□ 0.08
KRT6AP02538 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT6AP02538 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT6AP02538 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT6AP02538 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.52■□□□□ 0.08
KRT6AP02538 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.52■□□□□ 0.08
KRT6AP02538 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.52■□□□□ 0.08
KRT6AP02538 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT6AP02538 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.52■□□□□ 0.08
KRT6AP02538 AC061975.2-201ENST00000581722 295 ntBASIC15.52■□□□□ 0.08
KRT6AP02538 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT6AP02538 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT6AP02538 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
KRT6AP02538 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT6AP02538 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT6AP02538 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
KRT6AP02538 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
KRT6AP02538 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms