Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQA2P01906 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 WASH6P-202ENST00000359512 1437 ntBASIC14.41□□□□□ -0.1
HLA-DQA2P01906 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AL596257.1-201ENST00000641463 2694 ntBASIC14.41□□□□□ -0.1
HLA-DQA2P01906 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 PRYP6-201ENST00000514804 343 ntBASIC14.41□□□□□ -0.1
HLA-DQA2P01906 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AC068137.2-201ENST00000605408 478 ntBASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AC068418.2-201ENST00000577309 3703 ntBASIC14.41□□□□□ -0.1
HLA-DQA2P01906 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQA2P01906 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 ZNF259P1-201ENST00000407656 1365 ntBASIC14.4□□□□□ -0.1
HLA-DQA2P01906 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 AC034105.1-201ENST00000563488 319 ntBASIC14.4□□□□□ -0.1
HLA-DQA2P01906 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 AC145285.3-201ENST00000564603 959 ntBASIC14.4□□□□□ -0.1
HLA-DQA2P01906 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 AC144831.1-201ENST00000573312 2656 ntBASIC14.4□□□□□ -0.1
HLA-DQA2P01906 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms