Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LTAP01374 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LTAP01374 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.07□□□□□ -0.48
LTAP01374 AC005912.2-201ENST00000619492 2400 ntBASIC12.07□□□□□ -0.48
LTAP01374 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LTAP01374 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LTAP01374 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LTAP01374 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LTAP01374 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 AC148477.4-201ENST00000613430 1793 ntBASIC12.06□□□□□ -0.48
LTAP01374 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 DUSP5P1-201ENST00000441325 1139 ntBASIC12.06□□□□□ -0.48
LTAP01374 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 FGFR3P6-201ENST00000457012 610 ntBASIC12.06□□□□□ -0.48
LTAP01374 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.06□□□□□ -0.48
LTAP01374 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.06□□□□□ -0.48
LTAP01374 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.06□□□□□ -0.48
LTAP01374 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.06□□□□□ -0.48
LTAP01374 AC025062.2-201ENST00000605477 670 ntBASIC12.06□□□□□ -0.48
LTAP01374 AC008667.4-201ENST00000607370 168 ntBASIC12.06□□□□□ -0.48
LTAP01374 AL732292.2-201ENST00000609649 430 ntBASIC12.06□□□□□ -0.48
LTAP01374 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 MIR600HG-201ENST00000449175 5984 ntBASIC12.06□□□□□ -0.48
LTAP01374 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.06□□□□□ -0.48
LTAP01374 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.06□□□□□ -0.48
LTAP01374 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LTAP01374 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
LTAP01374 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.06□□□□□ -0.48
LTAP01374 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LTAP01374 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 AC127383.1-201ENST00000444697 1800 ntBASIC12.05□□□□□ -0.48
LTAP01374 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms