Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CYP4F24P-201ENST00000586049 1580 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 AL691432.1-201ENST00000596308 1422 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 SPDYE17-201ENST00000412399 783 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.4■□□□□ 0.22
MT-CO1P00395 TSPY16P-201ENST00000449843 468 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.4■□□□□ 0.22
MT-CO1P00395 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.4■□□□□ 0.22
MT-CO1P00395 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 MIR3197-201ENST00000582241 73 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-CO1P00395 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.4■□□□□ 0.22
MT-CO1P00395 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-CO1P00395 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.4■□□□□ 0.22
MT-CO1P00395 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 AC087499.5-201ENST00000452760 1342 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-CO1P00395 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.4■□□□□ 0.22
MT-CO1P00395 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MT-CO1P00395 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MT-CO1P00395 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MT-CO1P00395 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-CO1P00395 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-CO1P00395 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-CO1P00395 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.39■□□□□ 0.21
MT-CO1P00395 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-CO1P00395 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.39■□□□□ 0.21
MT-CO1P00395 AC009477.1-201ENST00000452936 217 ntBASIC16.39■□□□□ 0.21
MT-CO1P00395 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-CO1P00395 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 AC009407.1-201ENST00000568958 598 ntBASIC16.39■□□□□ 0.21
MT-CO1P00395 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.39■□□□□ 0.21
MT-CO1P00395 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-CO1P00395 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
MT-CO1P00395 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 NFIC-211ENST00000641145 8399 ntBASIC16.39■□□□□ 0.21
MT-CO1P00395 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-CO1P00395 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MT-CO1P00395 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MT-CO1P00395 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-CO1P00395 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-CO1P00395 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.38■□□□□ 0.21
MT-CO1P00395 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
MT-CO1P00395 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-CO1P00395 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms