Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.15■□□□□ 0.34
CSPG5O95196 TDH-203ENST00000531764 1110 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.15■□□□□ 0.34
CSPG5O95196 TMEM261P1-201ENST00000604899 340 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 RPSAP52-203ENST00000622976 1023 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 CU634019.7-201ENST00000624153 1185 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 FP236241.2-201ENST00000624906 1185 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG5O95196 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG5O95196 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG5O95196 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CSPG5O95196 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 AC093525.8-201ENST00000624099 1342 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 PCDH8P1-201ENST00000428983 2773 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CSPG5O95196 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 CYP4F24P-201ENST00000586049 1580 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG5O95196 KRT8P44-201ENST00000441609 1350 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.14■□□□□ 0.34
CSPG5O95196 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CSPG5O95196 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CSPG5O95196 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CSPG5O95196 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CSPG5O95196 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.14■□□□□ 0.33
CSPG5O95196 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
CSPG5O95196 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.14■□□□□ 0.33
CSPG5O95196 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CSPG5O95196 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CSPG5O95196 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.14■□□□□ 0.33
CSPG5O95196 AC005622.1-201ENST00000636801 1703 ntBASIC17.14■□□□□ 0.33
CSPG5O95196 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 ACTBP11-201ENST00000436287 1126 ntBASIC17.14■□□□□ 0.33
CSPG5O95196 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.14■□□□□ 0.33
CSPG5O95196 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 KLF2P4-201ENST00000451959 1225 ntBASIC17.14■□□□□ 0.33
CSPG5O95196 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.14■□□□□ 0.33
CSPG5O95196 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.14■□□□□ 0.33
CSPG5O95196 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.14■□□□□ 0.33
CSPG5O95196 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.14■□□□□ 0.33
CSPG5O95196 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSPG5O95196 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG5O95196 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG5O95196 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CSPG5O95196 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 CICP6-201ENST00000457191 2729 ntBASIC17.13■□□□□ 0.33
CSPG5O95196 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.13■□□□□ 0.33
CSPG5O95196 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.13■□□□□ 0.33
CSPG5O95196 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
CSPG5O95196 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.13■□□□□ 0.33
CSPG5O95196 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.13■□□□□ 0.33
CSPG5O95196 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.13■□□□□ 0.33
CSPG5O95196 SLC25A47P1-201ENST00000531577 414 ntBASIC17.13■□□□□ 0.33
CSPG5O95196 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms