Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.69■□□□□ 0.26
BEST1O76090 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.68■□□□□ 0.26
BEST1O76090 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
BEST1O76090 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
BEST1O76090 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.68■□□□□ 0.26
BEST1O76090 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
BEST1O76090 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.68■□□□□ 0.26
BEST1O76090 TPRX2P-201ENST00000535362 881 ntBASIC16.68■□□□□ 0.26
BEST1O76090 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
BEST1O76090 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.68■□□□□ 0.26
BEST1O76090 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.68■□□□□ 0.26
BEST1O76090 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
BEST1O76090 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.68■□□□□ 0.26
BEST1O76090 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST1O76090 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BEST1O76090 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.67■□□□□ 0.26
BEST1O76090 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
BEST1O76090 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.67■□□□□ 0.26
BEST1O76090 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.67■□□□□ 0.26
BEST1O76090 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.67■□□□□ 0.26
BEST1O76090 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
BEST1O76090 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.67■□□□□ 0.26
BEST1O76090 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.67■□□□□ 0.26
BEST1O76090 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.67■□□□□ 0.26
BEST1O76090 AC015922.1-201ENST00000421102 1152 ntBASIC16.67■□□□□ 0.26
BEST1O76090 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 MEIS3P1-201ENST00000495167 958 ntBASIC16.67■□□□□ 0.26
BEST1O76090 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.67■□□□□ 0.26
BEST1O76090 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.67■□□□□ 0.26
BEST1O76090 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 TIMM17BP1-201ENST00000545713 516 ntBASIC16.67■□□□□ 0.26
BEST1O76090 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
BEST1O76090 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
BEST1O76090 SPDYE22P-201ENST00000582158 798 ntBASIC16.67■□□□□ 0.26
BEST1O76090 AL391069.4-201ENST00000609583 481 ntBASIC16.67■□□□□ 0.26
BEST1O76090 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms