Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.6■□□□□ 0.25
LRCH4O75427 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRCH4O75427 AC144831.1-201ENST00000573312 2656 ntBASIC16.6■□□□□ 0.25
LRCH4O75427 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRCH4O75427 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 TMBIM7P-203ENST00000641617 1718 ntBASIC16.59■□□□□ 0.25
LRCH4O75427 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.59■□□□□ 0.25
LRCH4O75427 HIST3H2BA-201ENST00000436555 524 ntBASIC16.59■□□□□ 0.25
LRCH4O75427 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.59■□□□□ 0.25
LRCH4O75427 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.59■□□□□ 0.25
LRCH4O75427 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.59■□□□□ 0.25
LRCH4O75427 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.59■□□□□ 0.25
LRCH4O75427 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.59■□□□□ 0.25
LRCH4O75427 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.59■□□□□ 0.25
LRCH4O75427 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.59■□□□□ 0.25
LRCH4O75427 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.59■□□□□ 0.25
LRCH4O75427 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH4O75427 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRCH4O75427 AC087481.3-201ENST00000602886 1894 ntBASIC16.59■□□□□ 0.25
LRCH4O75427 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LRCH4O75427 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.58■□□□□ 0.25
LRCH4O75427 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
LRCH4O75427 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.58■□□□□ 0.25
LRCH4O75427 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.58■□□□□ 0.25
LRCH4O75427 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH4O75427 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH4O75427 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
LRCH4O75427 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH4O75427 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH4O75427 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRCH4O75427 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH4O75427 AC136604.1-201ENST00000418535 575 ntBASIC16.58■□□□□ 0.24
LRCH4O75427 SPDYE7P-202ENST00000420373 878 ntBASIC16.58■□□□□ 0.24
LRCH4O75427 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.58■□□□□ 0.24
LRCH4O75427 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.58■□□□□ 0.24
LRCH4O75427 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH4O75427 HLA-J-203ENST00000494367 1087 ntBASIC16.58■□□□□ 0.24
LRCH4O75427 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH4O75427 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.58■□□□□ 0.24
LRCH4O75427 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.58■□□□□ 0.24
LRCH4O75427 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
LRCH4O75427 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH4O75427 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH4O75427 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.58■□□□□ 0.24
LRCH4O75427 LINC00628-201ENST00000628516 1289 ntBASIC16.58■□□□□ 0.24
LRCH4O75427 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.58■□□□□ 0.24
LRCH4O75427 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.58■□□□□ 0.24
LRCH4O75427 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH4O75427 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRCH4O75427 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.58■□□□□ 0.24
LRCH4O75427 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
LRCH4O75427 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.58■□□□□ 0.24
LRCH4O75427 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRCH4O75427 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH4O75427 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms