Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 MTND6P24-201ENST00000440466 518 ntBASIC14.23□□□□□ -0.13
TRAF3IP2O43734 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 Z92544.3-201ENST00000624747 417 ntBASIC14.23□□□□□ -0.13
TRAF3IP2O43734 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAF3IP2O43734 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.22□□□□□ -0.13
TRAF3IP2O43734 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 CNN2P2-201ENST00000443536 909 ntBASIC14.22□□□□□ -0.13
TRAF3IP2O43734 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 CNN2P3-201ENST00000450201 906 ntBASIC14.22□□□□□ -0.13
TRAF3IP2O43734 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.22□□□□□ -0.13
TRAF3IP2O43734 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 AL450472.2-201ENST00000603663 1156 ntBASIC14.22□□□□□ -0.13
TRAF3IP2O43734 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 AL136317.3-201ENST00000618497 906 ntBASIC14.22□□□□□ -0.13
TRAF3IP2O43734 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 CICP6-201ENST00000457191 2729 ntBASIC14.22□□□□□ -0.13
TRAF3IP2O43734 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF3IP2O43734 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms