Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HDAC3O15379 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HDAC3O15379 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HDAC3O15379 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HDAC3O15379 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.59■□□□□ 0.09
HDAC3O15379 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
HDAC3O15379 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
HDAC3O15379 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HDAC3O15379 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
HDAC3O15379 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HDAC3O15379 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HDAC3O15379 AC126365.1-201ENST00000578585 1514 ntBASIC15.58■□□□□ 0.09
HDAC3O15379 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
HDAC3O15379 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HDAC3O15379 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.58■□□□□ 0.09
HDAC3O15379 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HDAC3O15379 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HDAC3O15379 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HDAC3O15379 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
HDAC3O15379 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HDAC3O15379 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.58■□□□□ 0.08
HDAC3O15379 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HDAC3O15379 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HDAC3O15379 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.58■□□□□ 0.08
HDAC3O15379 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HDAC3O15379 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.58■□□□□ 0.08
HDAC3O15379 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.58■□□□□ 0.08
HDAC3O15379 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 AC108751.1-201ENST00000490852 363 ntBASIC15.58■□□□□ 0.08
HDAC3O15379 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.58■□□□□ 0.08
HDAC3O15379 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.58■□□□□ 0.08
HDAC3O15379 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HDAC3O15379 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.58■□□□□ 0.08
HDAC3O15379 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
HDAC3O15379 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HDAC3O15379 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.58■□□□□ 0.08
HDAC3O15379 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HDAC3O15379 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.57■□□□□ 0.08
HDAC3O15379 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.57■□□□□ 0.08
HDAC3O15379 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.57■□□□□ 0.08
HDAC3O15379 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.57■□□□□ 0.08
HDAC3O15379 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.57■□□□□ 0.08
HDAC3O15379 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 VN2R19P-201ENST00000442399 1052 ntBASIC15.57■□□□□ 0.08
HDAC3O15379 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 FAM197Y8-203ENST00000450145 560 ntBASIC15.57■□□□□ 0.08
HDAC3O15379 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HDAC3O15379 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
HDAC3O15379 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.57■□□□□ 0.08
HDAC3O15379 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.57■□□□□ 0.08
HDAC3O15379 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.57■□□□□ 0.08
HDAC3O15379 IFNL4P1-201ENST00000607083 540 ntBASIC15.57■□□□□ 0.08
HDAC3O15379 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HDAC3O15379 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.57■□□□□ 0.08
HDAC3O15379 AC023908.3-201ENST00000564211 3047 ntBASIC15.57■□□□□ 0.08
HDAC3O15379 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 AC013726.1-201ENST00000563747 2285 ntBASIC15.57■□□□□ 0.08
HDAC3O15379 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
HDAC3O15379 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms