Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 USP32P1-208ENST00000506594 1164 ntBASIC18.2■□□□□ 0.5
ATP2A1O14983 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2A1O14983 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2A1O14983 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2A1O14983 AC133539.2-201ENST00000604757 467 ntBASIC18.2■□□□□ 0.5
ATP2A1O14983 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2A1O14983 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
ATP2A1O14983 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 AC084018.2-201ENST00000613093 2607 ntBASIC18.2■□□□□ 0.5
ATP2A1O14983 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ATP2A1O14983 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATP2A1O14983 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2A1O14983 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ATP2A1O14983 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2A1O14983 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2A1O14983 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2A1O14983 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2A1O14983 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.19■□□□□ 0.5
ATP2A1O14983 HLA-V-201ENST00000429037 534 ntBASIC18.19■□□□□ 0.5
ATP2A1O14983 ACTG1P3-201ENST00000431775 1114 ntBASIC18.19■□□□□ 0.5
ATP2A1O14983 RPS2P32-201ENST00000439199 892 ntBASIC18.19■□□□□ 0.5
ATP2A1O14983 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2A1O14983 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 AC119751.2-201ENST00000504529 210 ntBASIC18.19■□□□□ 0.5
ATP2A1O14983 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2A1O14983 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2A1O14983 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2A1O14983 KRT8P22-201ENST00000562317 1415 ntBASIC18.19■□□□□ 0.5
ATP2A1O14983 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 BTNL10-201ENST00000595971 695 ntBASIC18.19■□□□□ 0.5
ATP2A1O14983 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2A1O14983 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A1O14983 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A1O14983 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2A1O14983 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATP2A1O14983 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATP2A1O14983 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 AC006449.6-201ENST00000612330 2296 ntBASIC18.18■□□□□ 0.5
ATP2A1O14983 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
ATP2A1O14983 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATP2A1O14983 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATP2A1O14983 MIR658-201ENST00000385210 100 ntBASIC18.18■□□□□ 0.5
ATP2A1O14983 BOLA2P3-201ENST00000404566 256 ntBASIC18.18■□□□□ 0.5
ATP2A1O14983 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.18■□□□□ 0.5
ATP2A1O14983 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2A1O14983 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP2A1O14983 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP2A1O14983 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP2A1O14983 ENPP7P5-201ENST00000541031 1031 ntBASIC18.18■□□□□ 0.5
ATP2A1O14983 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2A1O14983 AC000095.1-201ENST00000603208 874 ntBASIC18.18■□□□□ 0.5
ATP2A1O14983 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.18■□□□□ 0.5
ATP2A1O14983 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP2A1O14983 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A1O14983 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ATP2A1O14983 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms