Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AL607033.1-201ENST00000623900 1599 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 CETN4P-206ENST00000642099 2168 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC013268.4-201ENST00000637413 2228 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AL080243.2-201ENST00000418783 582 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 MIR4453-201ENST00000584019 89 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC015911.4-201ENST00000588022 1070 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC027612.4-201ENST00000605371 583 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 MIR6069-201ENST00000620069 79 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC023157.3-201ENST00000619086 2088 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AL109954.1-202ENST00000564051 2148 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 AC126365.1-201ENST00000578585 1514 ntBASIC14.09□□□□□ -0.15
NPIPB4C9JG80 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB4C9JG80 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPB4C9JG80 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AC073347.1-201ENST00000421633 2643 ntBASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AC006486.2-201ENST00000624246 2199 ntBASIC14.08□□□□□ -0.16
NPIPB4C9JG80 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 KRT18P13-201ENST00000400056 1290 ntBASIC14.08□□□□□ -0.16
NPIPB4C9JG80 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 HLA-V-204ENST00000476601 1289 ntBASIC14.08□□□□□ -0.16
NPIPB4C9JG80 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 SNHG9-202ENST00000564014 471 ntBASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 AC079781.4-201ENST00000641908 219 ntBASIC14.08□□□□□ -0.16
NPIPB4C9JG80 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPB4C9JG80 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms