Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 AF228730.6-201ENST00000641497 218 ntBASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 AC084121.3-201ENST00000641716 218 ntBASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YJEFN3A6XGL0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 AP005117.1-202ENST00000581724 1908 ntBASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 KRT18P64-201ENST00000434946 1219 ntBASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 RPL13P2-201ENST00000440687 659 ntBASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 SRD5A3P1-201ENST00000603021 949 ntBASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 AC009118.2-201ENST00000613275 655 ntBASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
YJEFN3A6XGL0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
YJEFN3A6XGL0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.58■□□□□ 0.25
YJEFN3A6XGL0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
YJEFN3A6XGL0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
YJEFN3A6XGL0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.58■□□□□ 0.25
YJEFN3A6XGL0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 GNAQP1-201ENST00000444815 1067 ntBASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 MIR3197-201ENST00000582241 73 ntBASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.58■□□□□ 0.24
YJEFN3A6XGL0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms