Protein–RNA interactions for Protein: A6NNM3

RIMBP3B, RIMS-binding protein 3B, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3BA6NNM3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 CLUHP2-201ENST00000426660 1303 ntBASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 GGT3P-204ENST00000453783 1664 ntBASIC24.48■■□□□ 1.51
RIMBP3BA6NNM3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 AC053503.3-201ENST00000448375 114 ntBASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 RN7SL846P-201ENST00000467429 292 ntBASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 AC106047.2-201ENST00000511723 743 ntBASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 AC011471.3-201ENST00000623576 402 ntBASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 AL592424.1-201ENST00000563624 1536 ntBASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 LINC01144-201ENST00000626198 1710 ntBASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC24.47■■□□□ 1.51
RIMBP3BA6NNM3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AC078875.1-201ENST00000431907 724 ntBASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AL592076.1-201ENST00000424448 303 ntBASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 AC006548.2-201ENST00000605217 529 ntBASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 MBLAC2-202ENST00000514906 1936 ntBASIC24.46■■□□□ 1.51
RIMBP3BA6NNM3 FRMPD2B-201ENST00000431305 1347 ntBASIC24.45■■□□□ 1.51
RIMBP3BA6NNM3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RIMBP3BA6NNM3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC24.45■■□□□ 1.51
RIMBP3BA6NNM3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC24.45■■□□□ 1.51
RIMBP3BA6NNM3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
RIMBP3BA6NNM3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC24.45■■□□□ 1.51
RIMBP3BA6NNM3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 AC008805.1-201ENST00000590892 364 ntBASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3BA6NNM3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 JPT2-203ENST00000382711 894 ntTSL 4 BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3BA6NNM3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms