Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 APRT-204ENST00000563655 709 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 AL033527.4-201ENST00000641026 673 ntBASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 HR-201ENST00000312841 5351 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC144AA2RUR9 LTB4R2-202ENST00000528054 3092 ntBASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 AP001063.1-201ENST00000568332 529 ntBASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 AC009486.1-201ENST00000569860 813 ntBASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 CYP2T1P-202ENST00000641596 2535 ntBASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 PCDH8P1-201ENST00000428983 2773 ntBASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC144AA2RUR9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC144AA2RUR9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AL355864.2-201ENST00000447420 863 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 BCRP2-202ENST00000447763 634 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 CTBP2P5-201ENST00000454986 1264 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 BCRP6-201ENST00000510112 632 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 BCRP7-201ENST00000511549 544 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 GNRHR2-203ENST00000581100 1187 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms