Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 MIR661-201ENST00000384842 89 ntBASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 MTND6P24-201ENST00000440466 518 ntBASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AL138828.2-201ENST00000615812 383 ntBASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPDC1A2A3K4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 TERF1P3-201ENST00000505638 1227 ntBASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 AC024267.1-201ENST00000582320 895 ntBASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 AL590560.3-201ENST00000623350 461 ntBASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPDC1A2A3K4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPDC1A2A3K4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPDC1A2A3K4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPDC1A2A3K4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.77■□□□□ 0.59
PTPDC1A2A3K4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPDC1A2A3K4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PTPDC1A2A3K4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 HYMAI-201ENST00000635591 3347 ntBASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 AC004890.2-204ENST00000481968 304 ntBASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 LINC02560-201ENST00000596379 459 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms