Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AL513477.1-201ENST00000602865 2407 ntBASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MRPL3P1-201ENST00000400109 1033 ntBASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AL450487.1-201ENST00000426799 995 ntBASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AL662844.1-201ENST00000546340 181 ntBASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AC006486.2-201ENST00000624246 2199 ntBASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 AL109954.1-202ENST00000564051 2148 ntBASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00959A0A1B0GUT2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 RNA5SP419-201ENST00000515908 135 ntBASIC10.92□□□□□ -0.66
LINC00959A0A1B0GUT2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms